A Publication of Separation of Church and State Law Ministry.
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Copyright © February 27, 2018
The first Baptist church in Newport was formed under the ministry of Dr. John Clarke. According to some who suppose that the church was founded by Clarke and his company upon their arrival in Rhode Island, it could have been established as early as 1638.
Under the leadership of Dr. Clarke, Rhode Island became a government of religious liberty. When elected General Treasurer and General Assistant for Newport in 1650, Dr. Clarke added law and politics to his already crowded professions of medicine and religious ministry. “As a servant of the people, Dr. Clarke would steer the colony toward a government of unprecedented civil and religious liberty—convinced that any other move would be in the direction of a self-centered autocratic theocracy.” The people followed him as he steered a course between democracy with its “attending threat of anarchy and all of its evils of disorder, violence, and ultimate chaos,” and aristocracy and its restrictions on all forms of liberty.
Dr. Clarke and two friends were persecuted when they went to Massachusetts in 1651. He, Obadiah Holmes, and John Crandal went to visit a friend in Boston. They were on “an errand of mercy and had traveled all the way from their church in Newport to visit one of their aging and blind members, William Witter.” They stayed over, and held a service on Sunday. During that service, they were arrested and jailed. Before they were brought to trial, they were forced to attend a Congregational Puritan religious meeting. There, they refused to remove their hats, and Dr. Clarke stood and explained why they declared their dissent from them.
They were charged with denying infant baptism, holding a public worship, administering the Lord’s Supper to an excommunicated person, to another under admonition, proselytizing the Baptist way and rebaptizing such converts, and failing to post security or bail and other ecclesiastical infractions. He asked for a public debate on his religious views, which the Puritans avoided. “Clarke said they were examined in the morning of July 31 and sentenced that afternoon without producing any accuser or witness against them,” and that “Governor John Endicott even insulted the accused and denounced them as ‘trash.’” Dr. Clarke was “fined twenty pounds or to be well whipped;” Mr. Crandal was fined five pounds, only for being with the others; and Mr. Holmes was held in prison, where sentence of a fine of thirty pounds or to be well whipped was entered.  A friend paid Mr. Clarke’s fine. Mr. Clarke and Mr. Crandal were released.
Mr. Holmes was beaten mercilessly. His infractions were denying infant baptism, proclaiming that the church was not according to the gospel of Jesus Christ, receiving the sacrament while excommunicated by the church, and other spiritual infractions. Mr. Holmes refused to pay his fine, prepared for the whipping by “communicat[ing] with [his] God, commit[ting] himself to him, and beg[ging] strength from him.” Holmes was confined over two months before his whipping. He related the experience of being whipped for the Lord as follows, in part:
- “And as the man began to lay the strokes upon my back, I said to the people, though my flesh should fail, and my spirit should fail, yet my God would not fail. So it please the Lord to come in, and so to fill my heart and tongue as a vessel full, and with an audible voice I broke forth praying unto the Lord not to lay this sin to their charge; and telling the people, that now I found he did not fail me, and therefore now I should trust him forever who failed me not; for in truth, as the strokes fell upon me, I had such a spiritual manifestation of God’s presence as the like thereof I never had nor felt, nor can with fleshly tongue express; and the outward pain was so removed from me, that indeed I am not able to declare it to you, it was so easy to me, that I could well bear it, yea, and in a manner felt it not although it was grievous as the spectators said, the man striking with all his strength (yea spitting in [on] his hand three times as many affirmed) with a three-corded whip, giving me therewith thirty strokes. When he had loosed me from the post, having joyfulness in my heart, and cheerfulness in my countenance, as the spectators observed, I told the magistrates, You have struck me as with roses; and said moreover, Although the Lord hath made it easy to me, yet I pray God it may not be laid to your charge.”
Mr. Holmes “could take no rest but as he lay upon his knees and elbows, not being able to suffer any part of his body to touch the bed whereupon he lay.”
Two men who shook Mr. Holmes’ hand after the beating were, without trial and without being informed of any written law they had broken, sentenced to a fine of forty shillings or to be whipped. Although they refused to pay the fines, others paid their fines and were released.
Of course, the Puritans were fully persuaded of the righteousness of persecution. Here are two examples of their reasoning. Sir Richard Saltonstall wrote to Messrs. Cotton and Wilson of Boston condemning them for this tyranny in Boston, for “compelling any in matters of worship to do that whereof they are not fully persuaded” thus making “them sin, for so the apostle (Rom. 14 and 23) tells us, and many are made hypocrites thereby,” etc. Mr. Cotton replied in part:
“If it do make men hypocrites, yet better be hypocrites than profane persons. Hypocrites give God part of his due, the outward man, but the profane person giveth God neither outward nor inward man. We believe there is a vast difference between men’s inventions and God’s institutions; we fled from men’s inventions, to which we else should have been compelled; we compel none to men’s inventions. If our ways (rigid ways as you call them) have laid us low in the hearts of God’s people, yea, and of the saints (as you style them) we do not believe it is any part of their saintship.”
A second example occurred when some protested being taxed to support the state-church with which they did not agree. The main point of the answer received was as follows:
- “What we demand of you is equal and right; what you demand of us is evil and sinful; and hence we have the golden rule upon our side, while you are receding and departing from it; for if we were in an error, and out of the right way, as we see and know that you are in several respects, and you see and know it is of us, as we do of you, we think the golden rule would oblige you to tell us of our error, and not let us alone to go on peaceably in it, that is without proper means to recover and reclaim us; whether by the laws of God, or the good and wholesome laws of the land, as we now treat you.” 
 Isaac Backus, A History of New England With Particular Reference to the Denomination of Christians called Baptists, Volume 1 (Eugene, Oregon: Wipf & Stock Publishers, Previously published by Backus Historical Society, 1871), pp. 125-26 and fn. 1, p. 125; see also James R. Beller, America in Crimson Red: The Baptist History of America (Arnold, Missouri: Prairie Fire Press, 2004), p p. 31-33. Mr. Beller argues that the Baptist church in Newport, meeting in the wilderness in 1637 with Dr. John Clarke as pastor, was the first Baptist church to meet in America. Mr. Beller considers the writings of Isaac Backus, John Callender, and John Winthrop on this subject. For more on this, see Did Roger Williams Start The First Baptist Church In America? Is the “Baptist Church the Bride of Christ? What About Landmarkism or the Baptist Church Succession Theory By Jim Fellure and Baptist History IN AMERICA Vindicated: The First Baptist Church in America/A Resurfaced Issue of Controversy/The Facts and Importance By Pastor Joshua S. Davenport
 Louis Franklin Asher, John Clarke (1609-1676): Pioneer in American Medicine, Democratic Ideals, and Champion of Religious Liberty (Paris, Arkansas: The Baptist Standard Bearer, Inc.), p. 35.
 Ibid., pp. 35-36.
 Obadiah Holmes moved from England to Massachusetts. He and several others decided the Baptist way was right and were baptized. He and others were excommunicated in 1650. They moved to Rhode Island where Mr. Holmes became a member of the church pastored by Dr. John Clarke.
 Asher, p. 57; See John Clarke, Ill News from New-England or A Narative of New-Englands Persecution (Paris, Ark.: The Baptist Standard Bearer, Inc., Reprint: 1st printed in 1652), pp. 27-65 for a full account of the event; John T. Christian, A History of the Baptists, Volume I, (Texarkana, Ark.-Tex.: Bogard Press, 1922), p p. 379-381.
 Ibid., p. 59, citing John Clarke, Ill News from New England: or a Narative of New-Englands Persecution…Also four conclusions touching the faith and order of the Gospel of Christ out of his last Will and Testament, confirmed and justified (London: Printed by Henry Hills, 1652), pp. 30-31, 33.
 Backus, Volume 1, pp. 180, 187; Asher, p. 60.
 Ibid., fn. 1, p. 189.
 Ibid., p. 190.
 Ibid., p. 192; Clarke, pp. 50-51.
 Ibid., fn. 1, p. 193. (This from a manuscript of Governor Joseph Jencks).
 See Clarke, pp. 55-62 for the personal accounts of John Spur and John Hazell.
 Backus, A History of New England…, Volume 1, pp. 198-199.
 Ibid., p. 200.
 Ibid., p. 201.